Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFPQVLTIAGSDSGGGAGIQADIKTFQERRTFGMSVITAITAQNTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVVRNIRLHNFPNLVIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILGEKITTKAEIERAAKKIYDMGVKAVVIKGGHSEMTEAADFYFDGVTAKWLTSERFDTPHTHGTGCTFSACIAAELAKGNSLLDSVMVAKEFISSAIKYPLGIGHGHGPTNHFAYRMEDGK |
| 1UB0 Chain:A ((1-256)) | --MRVALTIAGSDSGGGAGVQADLKVFFRFGVYGTSALTLVTAQNTLGVQRVHLLPPEVVYAQIESVAQDFPLHAAKTGALGDAAIVEAVAEAVRRFGVRPLVVDPVM---------AKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRTLKEAEEAAKALLALGPKAVLLKGGHL---EAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGRPLAEAVAEAKAYLTRALKTAPSLGHGHGPLDH--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133444 for 2229 contacts (-59.9/contact) +
2D Compatibility (PS) -26745 + (NN) -8120 + (LL) 1836
1D Compatibility (HY) -15200 + (ID) 5850
Total energy: -187523.0 ( -84.13 by residue)
QMean score : 0.580
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