Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNEALGLIEVTGFLGAVVAADTCLKAANVELIQCEVISGGLTTVELTGDVGAVNAAIEAGKAATEDLGCLVSSHVIARMSEDTKALFVPQEEAKPQPKEIKQEEPKEVIQKVVEVNTNTKSTEKKLRAMKVIDLRKLAYTLDNVPIPKSKIKYANKDKLVHALKDIYGRSEN
4RBU Chain:I ((10-96))
---EALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGQGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKIL---------PK--------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4RBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53413 for 673 contacts (-79.4/contact) +
2D Compatibility (PS) -9322 + (NN) -2102 + (LL) 6276
1D Compatibility (HY) -6000 + (ID) 2000
Total energy: -66561.0 ( -98.90 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_4RBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RBU-query.scw
PDB file :
Tito_Scwrl_4RBU.pdb
: