Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDKKFLLTNSTIGIIGGGQLGRMLALAAKAMGYRIIVLDPTADCPAAQVS--DEQIIADYDDKVALRELSEKADVVTYEFENIDYDALKMTQN-LVSVPQGSELLSITQDRILEKAYLESANINIAPYAVI--VEQDEIENEIKSIGYPAVLKTAQGGYDGKGQVVIHDARDIETAARLLRYGSCVLEAWIPFEKEISVVVARNLDGQIETFPVAENVHVNNILHTTMVPAD-VAADVYEEAEEIARKLAEVLQLCGVLAVEMFVTKSGAIYVNELAPRPHNSGHFTIEACSISQFTQHIRAIVGLPLVKPEL--LKPAVMINILGQHV----DAVNKQMVNYPHWFVHYYGKKEA-KINRKMGHVTVLADEPKAVIQDLEETQIWK |
| 3K5I Chain:A ((21-398)) | -----MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLDADN-SPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTAEIEHVDTYALEEVASEVKI-EPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTPAELAKVGEQLGYPLMLKSKTMAYDGRGNFRVNSQDDIPEALEALKDRPLYAEKWAYFKMELAVIVVKT-KDEVLSYPTVETVQEDSICKLVYAPARNVSDAINQKAQELARKAVAAFDGKGVFGVEMFLLEDDSIMLCEIASRIHNSGHYTIEGCALSQFDAHLRAILDLPIPAQSLEIRQPSIMLNIIGGAAPDTHLQAAECALSIPNASIHLY-SKGAAKPGRKMGHITVTAPTMHEAETHIQPLIDVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208700 for 3204 contacts (-65.1/contact) +
2D Compatibility (PS) -40925 + (NN) -20924 + (LL) 480
1D Compatibility (HY) -20800 + (ID) 5800
Total energy: -296669.0 ( -92.59 by residue)
QMean score : 0.475
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