Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKPQTRSQYRNKQSGGSKKKSQKRGKRVAANIFKTIFFVGLFLAFFGIAAGATVFYDYAKDAPKLTDSKLRDPLSSKLLDKDGKVFAEVGTERREYIEYKDIPETLKNAILTTEDARFYEHDGIDPIRLGGAVIANLTDGFGAEGASTLSQQIIKMSYLDYTNKTLARKAQEAWLALQ---LEEKYSKNDILEIYVNKVYMSDRVHGMQTASEHYFGKNVKDLTLAQTALLAGMPQSPNNYNPYEHPEAAKKRRDQVLTNMYTHDKITKEEMTEAQKTPITTGLRSKKDREDKIYKYDSYVTQVLSEIPKE-----YDVY-----RDGLTIHTALDRDAQEYTEK-------------------------------------MLNTNEIVNFTDDEM------------------------------------------------QAGIVLQDTKTGRVQAIGGGRKQKVTRGYNYATQVKRSVGSTMKPIADYGPAFEYLDWSTAHILEDEPYTYSGGTPINNWDFGYKGPISVRQALYQSRNIPALKTLQAVGLDKSEEFVNKLGITYDEGQNVESNAIGANSSNPMQMAGAYAAFGNKGIYNKPHTVTKIVLSDGQTEIDTEP------------QSTVAMKESTAYMVSDVLKDVLSIGTGTSAAVPGVPAAGKTGTTNIPPEFTSKYYYPSGAARDSWFAGYTTNYSIAVWTGYDDKKKY-VSASEQKIAQRMFSKLMAHASAGKTTADFKMPSNVVSVPILKGSNPIARAAQGTSSDKVSYELFLSGTAPTKTASTPEDEKKKAEEAAKKKKAEEDKKKTDEEKKKEEEAKKKAEEEAKKKAEEEAKNLTAPAGLRASYNAGSKQINVSWSAVEGATYEVTVNGSTTTVSSTSVSVSGGNPGDTVSINVVAVKDGKRSPASSTTVKIPDS |
| 3UDI Chain:A ((19-727)) | ------------------------------------------------------------------------------------------------------------------------------KPLQVYT------------ADNQLIAEYGGK-LSIPVEYKQIPPNFIHAFLAAEDSSFFQNLSKEDILSLYVNKIFLGKNAYGIAAAAKIYYNKSINELSIAQMAMIAGLPKAPSKYNPVVNPERALERRNWILGRMLQLGYISQAEYQKAVAEPINLNMPNRDLNNIHPYAGEMVRSELVKHFGEQAIDSGYKVYTTINAKRQAIAEKAVQDGLEAYDRRHGWRGAEAHDKPLSEFRAYANTYPAQVTKVNSSSFEALMQDGSTVTVQWSGMSWARPYRNANSVGAAPSRASQIVKVKDIVRLRPNEAKTAWSLVQVPKVQGQLIAINPNDGSIEAIVGGYNFYQSK-FNRALQGWRQPGSTIKPFL-YALALER-GMTPYSMVNDSPITIGKWTP-KNSDGRYLGMIPLRRALYLSRNTVSVRLLQTVGIERTRQLFMDFGLQEDQIPRNYTIALGTPQVLPIQMATGYATFANGGYRVQPHFIQRIEDAYGKVIYEAKPEYACIPCINAYRQAQRILKSSSAYDMANILRDVIEHGTGKIGRSD---LGGKTGTTN--------------DAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFMGQALQGTPAAWVRLE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29713 for 4092 contacts (-7.3/contact) +
2D Compatibility (PS) -52060 + (NN) -19211 + (LL) 17984
1D Compatibility (HY) -30000 + (ID) 6950
Total energy: -119950.0 ( -29.31 by residue)
QMean score : 0.365
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