Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWRLTGNSSLP---IYLQIVDLIETKIMNGELLPEEKLPPERQLAEMFGVNRSTVVRALDELTARAVIIRKQGSGTTVN------AEKWGLFAGQSTNWRHYLTQGGFTPAVPYIRQAGVMERANSDNVIDAASGELPLEMTPKMETPSLSWQSFIAEEQQEDEAGYKPLRETIQKQMKEAYGLQTRSEQIFITSGAQQALFLITQCLLKPGDAVAIESPSYFYSLSLFQSAGLRIFALPMDEDGVVISELRDLYHKHRVKMVFVNPTFQNPTGLVMSLKRRKELVKICAH-LQIPIVEDDPFSELGALDNQIPAPLKRLDT-DNVLYIGSLSKIMGSTTRIGWLIGPTAVIERLALARQEMDFGLSIFPQVLANSVLNTAGYKAHLLQLHHVLEQRRDDLIEAFEAILPSEVTFIKPKGGFHLWVKLPVEFRSVRDFDIFLANDLLVMPGFL-FGVKE-------AVIRVTYARLEKKEARRVAEIIKQILVSKKCEEA |
| 4MGR Chain:A ((2-469)) | DITITLDRSEQADYIYQQIYQKLKKEILSRNLLPHSKVPSKRELAENLKVSVNSVNSAYQQLLAEGYLYAIERKGFFVEELDMFSAEEHPPFALPDDLKEIHIDQSDWIS----------FSHMSSDT------DHFPIKSWFRCEQKAASR-SYRTLGDMSHPQGIYEVRAAITRLISLTRGVKCRPEQMIIGAGTQVLMQLLTELLPKEA-VYAMEEPGYRRMYQLLKNAGKQVKTIMLDEKGMSIAEITRQ----QPDVLVTTPSHQFPSGTIMPVSRRIQLLNWAAEEPRRYIIEDDYDSEFTYDVDSIPA-LQSLDRFQNVIYMGTFSKSLLPGLRISYMVLPPELLRAYKQRGYDLQT-CSSLTQLTLQEFIESGEYQKHIKKMKQHYKEKRERLITALEAEFSGEVTVKGANAGLHFVTEFDTR-RTEQDILSHAAGLQLEIFGMSRFNLKENKRQTGRPALIIGFARLKEEDIQEGVQRLFKAVY------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230759 for 3510 contacts (-65.7/contact) +
2D Compatibility (PS) -48765 + (NN) -22644 + (LL) 2072
1D Compatibility (HY) -24800 + (ID) 5800
Total energy: -330696.0 ( -94.22 by residue)
QMean score : 0.472
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