Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHLIPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD
3P0T Chain:A ((5-135))
-MASIFTKIINRELPGRFVYEDDDVVAFLTIEPMTQGHTLVVPREEIDNWQDVDSAAFNRVMGVSQLIGKAVCKAFRTERSGL-----IIAGLEVPHLHVHVFPTRSLS-DFGFANVD--RNPSPESLDEAQAKIKAALA
General information:
TITO was launched using:
RESULT:
Template:
3P0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73826 for 976 contacts (-75.6/contact) +
2D Compatibility (PS) -14458 + (NN) -7028 + (LL) 236
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -105226.0 ( -107.81 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_3P0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P0T-query.scw
PDB file :
Tito_Scwrl_3P0T.pdb
: