Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADY------AGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
4RHU Chain:B ((21-201))
----DIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYG-------VVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAV--NVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVYQ-
General information:
TITO was launched using:
RESULT:
Template:
4RHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119608 for 1267 contacts (-94.4/contact) +
2D Compatibility (PS) -18337 + (NN) -7473 + (LL) 372
1D Compatibility (HY) -20400 + (ID) 3750
Total energy: -169196.0 ( -133.54 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_4RHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHU-query.scw
PDB file :
Tito_Scwrl_4RHU.pdb
: