Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTPIISIIMGSKSDWGTMQKTAEVLDNFGIAYEKKVVSAHRAPDLMFKHAEEARGRGIKIIIAGAGGAAHLPGMVAAKTTLPVIGVPVKTRALSGLDSLYSIVQMPGGVPVATMAIGEAGATNAALTALRILSIEDQNLADALAHFHEEQGKIAEESSNELI
3OOW Chain:A ((5-164))
--SVQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQHTDINIAKALAEFRAEQTRFVLENPDPR-
General information:
TITO was launched using:
RESULT:
Template:
3OOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123694 for 1312 contacts (-94.3/contact) +
2D Compatibility (PS) -17589 + (NN) -8876 + (LL) 476
1D Compatibility (HY) -15200 + (ID) 5000
Total energy: -169883.0 ( -129.48 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_3OOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OOW-query.scw
PDB file :
Tito_Scwrl_3OOW.pdb
: