Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRYTGPSWKQSRRLGLSLTGTGKE-------LARRNYVPGQHGPNNRSKLSEYGLQLAEKQKLRFSYGLGEKQFRNLFVQATKAKEGTLGFNFMVLLERRLDNVVYRLGLATTRRQARQFVNHGHILVDGKRVDIPSYRVTPGQVISVREKSMKVPAILEAVEATLGRPA--FVSFDAEKLEGSLTRLPERDEINPEINEALVVEFYNKML
2E5L Chain:D ((2-208))
--RYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEEASK-KKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVNEQLVIEFYSR--
General information:
TITO was launched using:
RESULT:
Template:
2E5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59771 for 1424 contacts (-42.0/contact) +
2D Compatibility (PS) -21219 + (NN) -11937 + (LL) 708
1D Compatibility (HY) -15200 + (ID) 5150
Total energy: -112569.0 ( -79.05 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2E5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E5L-query.scw
PDB file :
Tito_Scwrl_2E5L.pdb
: