Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQVQYYGTGRRKSSVARVRLVPGEGRIVVNNREISEHIPSAALIEDIKQPLTLTE--TAGTYDVLVNVHGGGLSGQAGAIRHGIARALLEADPE-----YRTTLK------RAGLLTRDARMKERKKYGLKGARRAPQFSKR
3J7A Chain:M ((6-143))
---KRVQTFGKKKTAVAVATVTNGKGLIKLNGKNLDLVEPYI-LKTKVYEPLWLIGSGKLKNLDIRIRVKGGGQTSQIYAIRQAIGKGIISYYQKYVDESTKKELKDVLLRYDRSLLVGDTRRCEPKKFGGKGARARYQKSY-
General information:
TITO was launched using:
RESULT:
Template:
3J7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34481 for 869 contacts (-39.7/contact) +
2D Compatibility (PS) -13160 + (NN) -2331 + (LL) 716
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -54806.0 ( -63.07 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_3J7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7A-query.scw
PDB file :
Tito_Scwrl_3J7A.pdb
: