Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSKKPLFSVEERCELLREVTKDIPNITVETSQG-LLIDYAKRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMTNNQYSFLSSSIVKEVARYNGSVSEFVPPEVELALQQKFRQG
3ND7 Chain:B ((1-158))MRKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFI------LFTPEEKKYLIEEATKEMPNVRVIMQETQLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGGDVSDYLPPNIYHALKQK----


General information:
TITO was launched using:
RESULT:

Template: 3ND7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 674 -88906 -131.91 -588.78
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -131.91
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.402

(partial model without unconserved sides chains):
PDB file : Tito_3ND7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ND7-query.scw
PDB file : Tito_Scwrl_3ND7.pdb: