Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRYSEAAVVSHNGTSMTSYAI-SSAADIWDHISESTDVVAVDEVQFFDQEIVEVLSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGS-PASRTQRLIDGKPASYDDPVILVGAAESYEARCRHHHEVPGKSKK
4UXH Chain:A ((4-180))------RGRIELIIGPMFAGKTTELMRRVKREIHARRSCFVIKYSKDTRYDEHNVA----LMLRAQAAVSQLTEVRD-TWKRFDVLAIDEGQFFSD-LVDFCNTAADAGKVVMVSALDGDYRRKPFGQICELVPYCEAVDKLTAVCMMCHEQPACFTRRTVNV------EQQELIGGADMYIATCRECYSK------


General information:
TITO was launched using:
RESULT:

Template: 4UXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 859 -48852 -56.87 -285.68
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -56.87
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_4UXH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UXH-query.scw
PDB file : Tito_Scwrl_4UXH.pdb: