Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIANYTLKVKG-KTLLQDTDLHFSSGKINHVVGKNGVGKSQLAKDFL---LNNSKRIG--R---------DIRQNVSLISSSSNIPNDVSKDFLLHFLSKKFDAKMIDKIAYLLNLDNI-----------D--GKVLIKNLSDGQKQKLKLLSFLLEDKNIIVLDEITNSLDKKTVIEIHGFLNKYIQENPEKIIINITHDLSDLKAIEGDYYIFNHQEIQQYHSVDKLIEVYINE
4RY2 Chain:A ((486-709))IEFRNVDFRYGLRKPVLKNINLTIPKGKTVAIVGESGSGKTTLAKLLMNFYSPEKGDILINGHSIKNISLELIRKKIAFVSQDVFIFSG-TVKENLCLGNENVDM---DEIIKAAKMANAHDFIEKLPLKYDTFLNESGANLSEGQKQRLAIARALLKKPDILILDEATSNLDSITENHIKDAIYGLED--D-VTVIIIAHRLSTIV-NCDKIYLLKDGEIVESGSHTELIA-----


General information:
TITO was launched using:
RESULT:

Template: 4RY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 855 16600 19.42 84.69
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 19.42
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_4RY2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RY2-query.scw
PDB file : Tito_Scwrl_4RY2.pdb: