Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMDAANGVGLAANQIGCSLRLFVYDCAADRAMTARRRGVVINPVLETSEIPETMPDPDTDDEGCLSVPGESFPTGRAKWARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIGRYARNAKRAVKSHGWGVPGLSWLPGEDPDPFGH
4WXL Chain:B ((5-147))
----NVLIYPDDHLKVVCEPVTEVNDA-----IRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDK----QNQFVLINPEILASEGETGI------EEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYL-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4WXL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76102 for 1116 contacts (-68.2/contact) +
2D Compatibility (PS) -15161 + (NN) -3887 + (LL) 1552
1D Compatibility (HY) -13200 + (ID) 2550
Total energy: -109348.0 ( -97.98 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_4WXL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WXL-query.scw
PDB file :
Tito_Scwrl_4WXL.pdb
: