Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTGVTRQKILITGASSGLGAGMARSFAAQGRDLALCARRTDRLTELKAELSQRYPDIKIAVAELDVNDHERVPKVFAELSDEIGGIDRVIVNAGIGKGARLGSG-------KLWANKATIETNLVAAL---VQIETALDMFNQRGSGHLVLISSVLGVKGVPGVKAA-YAASKAGVRSLGESLRAEYAQRPIRVTVLEPGYIESEMTAKSASTMLMVDNATGVKALVAAIEREPGRAAVPWWPWAPLVRLMWVLPPRLTRRFA
2RHR Chain:A ((26-213))
----------LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL--REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-----RLGGGATAELADELWLD--VVETNLTGVFRVTKQVLKAGGML-ERGTGRIVNIASTGGKQGV--VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RHR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102931 for 1427 contacts (-72.1/contact) +
2D Compatibility (PS) -18785 + (NN) -4906 + (LL) 5692
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -137430.0 ( -96.31 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_2RHR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RHR-query.scw
PDB file :
Tito_Scwrl_2RHR.pdb
: