Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGR-PVAGDRALIMAIVNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGK----NTFHGLLLLRHVADLVMTG--WPVLMALSNKDVVGETL-GVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA |
| 2Y5S Chain:A ((13-277)) | --------------------------------CGRFELTFERPLVMGILNATP----------ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDTYKPAVMRAALAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRD----AGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRVHDVAAT------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135043 for 2105 contacts (-64.2/contact) +
2D Compatibility (PS) -26566 + (NN) -11426 + (LL) 3392
1D Compatibility (HY) -12000 + (ID) 4500
Total energy: -186143.0 ( -88.43 by residue)
QMean score : 0.420
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