Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDA-VRVTSAGTGNWHVGSCADERAAGVLRAHGYPTDHRAAQVGTEHLAA-DLLVALDRNHARLLRQLGVEA----ARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNGPS
1DG9 Chain:A ((1-157))
AEQVTKSVLFVCLGNICRSPIAEAVFRKLVTDQNISDNW-VIDSGAVSDWNVGRSPDPRAVSCLRNHGINTAHKARQVTKEDFVTFDYILCMDESNLRDLNRKSNQVKNCRAKIELLGSYDPQ---KQLIIEDPYYGNDADFETVYQQCVRCCRAFLEKVR---------
General information:
TITO was launched using:
RESULT:
Template:
1DG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90992 for 1224 contacts (-74.3/contact) +
2D Compatibility (PS) -16530 + (NN) -10735 + (LL) 248
1D Compatibility (HY) -12400 + (ID) 2650
Total energy: -133059.0 ( -108.71 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1DG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DG9-query.scw
PDB file :
Tito_Scwrl_1DG9.pdb
: