Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAPDVRLTAWVHGWVQGVGFRWWTRCRALELGLTGYAANHADGRVLVVAQGPRAACQKLLQLLQGDTTPGRVAKVVADWSQSTEQITGFSER
2BJD Chain:A ((12-101))
---MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDYSFSEYKGEFEDFETY
General information:
TITO was launched using:
RESULT:
Template:
2BJD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51866 for 694 contacts (-74.7/contact) +
2D Compatibility (PS) -10052 + (NN) -5451 + (LL) 324
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -75945.0 ( -109.43 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_2BJD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BJD-query.scw
PDB file :
Tito_Scwrl_2BJD.pdb
: