Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLDIRTVQGKASFPTVLRQAGADDADMLVAVTNSDETNMVACQVAYTLFNTPTKIARVREPAYLTRTGLFDNEAIPVDVLISPEQVVTNYIKRLIEHPGALQVIDFAEGKAQLVGIKAYYGGPLVGQELRQLREHMPNVDTRVAAIYRRNRPIIPQGDTVIEADDEVFFIAAKAHIRAVMGEMRRLDDSYKRIIIAGGGNVGERLAEAIESR-YQVKIIERSPLRCRHLSDTLDSTIVLNGSASDRDLLLEENIGETDVFLALTNDDEANIMSSLLAKR-LGASKVMTLINNPAYVDLVQGGEIDIAISPQLATIGTLLAHVRRGDIESVHSLRRGAAEAIEVVAHGDAKSSKVIGRSINEIKLPPGTTIGALVRDEEVLIAHGDTRIESGDHVLLFLVDKKYIRDVERLFQAGLTFF |
| 3L4B Chain:C ((1-216)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-KATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVSLVNDPGNMEIFKKMGITTVLNLTTLITNTVEALIFPDEFSSIIPLEQ-GIEFLSVNV---EEDSPVVGKKLKDLPLPRDSIIAAIVRGGVLVVPRGDTEILSGDKLYVIV-SAEAKETVEETLL------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3L4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122501 for 1605 contacts (-76.3/contact) +
2D Compatibility (PS) -23279 + (NN) -9901 + (LL) 16916
1D Compatibility (HY) -18400 + (ID) 2700
Total energy: -159865.0 ( -99.60 by residue)
QMean score : 0.434
|
|
|