Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAILNILEFPDPRLRTIAKPV---EVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEP-------RVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
1VEY Chain:A ((1-171))
-SVRKILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGILKQIVVVGSEDNERYPGTPDVPERIILNPVITPLTKDTSGFWEGCLSVPGMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQGILYVDRLKDTKLFGFNETLDS------
General information:
TITO was launched using:
RESULT:
Template:
1VEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66030 for 1222 contacts (-54.0/contact) +
2D Compatibility (PS) -16903 + (NN) -2048 + (LL) 856
1D Compatibility (HY) -15600 + (ID) 3450
Total energy: -103175.0 ( -84.43 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_1VEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VEY-query.scw
PDB file :
Tito_Scwrl_1VEY.pdb
: