Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MADALDSLRLMRTQERPAQVFVRGQGSWLWDSDGRAFLDFTQGLAVNCLGHSPSVLVQALARQARELVSAG----PGLLNRPVLALAQRLCLAT---GSDQAYFLTSGAEANEAAIALARKWGRLHRGGA-QRIVSTVNSIHGRTPGTLTACGKPAQH-------------------------GLEGFARVPFNDLDAMAAAIDE-------ETVAVMLEPVQGDAGVIPATLDYLRGIERLCRQRGVLLILDEVQTGIGRCGALLAEELYGVRA--DIVTLGKGLGAG-VPLSALLARGNACCFEPGDQLG-----THHGNALMTAAGLAVLNTVLEPGFLEQVREQGTHLRDGLARVARRYGH--GPLRGQGLFWGLPLI---------GQRAPAVVRAAFGEGLLINA----PQPHCLRFSPALTVSRANVDEMLRRLERALARVANRHEEVA |
| 1D7U Chain:A ((3-433)) | LNDDATFWRNARQHLVRYGG----TFEPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIG-EYAGKL--DHLFSG-MLSRPVVDLAT-RLANITPPGLDRALLLSTGAESNEAAIRMAKLVT----G--KYEIVGFAQSWHGMTGAAASATYSA-G-RKGVGPAAVGSFAIPAPFTYRPRFER-----NGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDG--VTPDILTLSKTLGAGL-PLAAIVTSAAIEERAHEL--GYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERF-DCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERAL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211691 for 2959 contacts (-71.5/contact) +
2D Compatibility (PS) -39652 + (NN) -19443 + (LL) 2804
1D Compatibility (HY) -23600 + (ID) 6100
Total energy: -297682.0 ( -100.60 by residue)
QMean score : 0.491
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