Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDCLFCKIVAGEVPARKFYEDEEVVAFHDIGPQAPVHFLVIPKRHIPTLEHLTEADRPLAGHILFTAQRLAREQGCEEGFRVVMNCNDLGGQTVHHIHMHVLGQRQMHWPPG
3O1C Chain:A ((15-126))
GDTIFGKIIRKEIPAKIIFEDDQALAFHDISPQAPTHFLVIPKKHISQISAAEDADESLLGHLMIVGKKCAADLGLKKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMNWPPG
General information:
TITO was launched using:
RESULT:
Template:
3O1C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97115 for 793 contacts (-122.5/contact) +
2D Compatibility (PS) -12471 + (NN) -10159 + (LL) 0
1D Compatibility (HY) -10000 + (ID) 2750
Total energy: -132495.0 ( -167.08 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_3O1C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1C-query.scw
PDB file :
Tito_Scwrl_3O1C.pdb
: