Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDYQETLYQGYGQRFSIDNMLHEVRTEHQHLVIFEN---ARMGRVMALDGVIQTTEADEFIYHEMLTHVPILAHGAARRVLIIGGGDGGMLREVAKHKSVERITMVEIDGTVVDMCKEFLPNHSQGAFDDPRLNLVIDDGMRFV-ATTEERFDVIISDSTDPIGPGEVLFSENFYQACRRCLNEGGILVTQNGTPFMQLEEVRTTA--ARTDGLFADWHFYQAAVPTYIGGAMTFAWGSTHEGLR-RLPLETLRQRFRDSGIAT--RYYNADIHLGAFALPQYVLQAIGKQDND |
| 4YUX Chain:A ((27-296)) | --------WPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR-SLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETG-FASVQYALMHVPTYPCGSIGTLVCSKKAGVDVTKPLRPV----EDMPFAKDLKYYDSEMHKASFALPRFARHINN----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -152527 for 2270 contacts (-67.2/contact) +
2D Compatibility (PS) -28187 + (NN) -13390 + (LL) 1940
1D Compatibility (HY) -24400 + (ID) 5250
Total energy: -221814.0 ( -97.72 by residue)
QMean score : 0.546
|
|
|