Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQILVLPGDGIGPEIMAEAVKVLELANDRFQLGFELAEDVIGGAAIDKHGVPLADQTLQRAR-QADAVLLGAVGGPKWDRIERDIRPERGLLKIRSQLGLFANLRPAILYPQLAAASSLKPEVVAGLDILIVRELTGGIYFGQPREQRVLEN--GERQAYDTLPYSESEIRRIARVGFDMARVRNN-------------RLCSVDKANVLASSQ-LWREVV---EEVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQG-LRTGDIWSEGCRKVGTREMGDAVVAALKNL |
| 3TY4 Chain:A ((15-364)) | ------LIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTH-KVAGYSSP---IVALRKKMGLYANVRPV---KSLDGAKG-KP-----VDLVIVRENTECLYV---KEERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANV-GDNFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAAD-IYTAVDKVLTEGKVLTPDLGG----KSGTNEITDAVLANI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163163 for 2817 contacts (-57.9/contact) +
2D Compatibility (PS) -35189 + (NN) -9032 + (LL) 1932
1D Compatibility (HY) -26800 + (ID) 6400
Total energy: -238652.0 ( -84.72 by residue)
QMean score : 0.477
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