Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MSDKKTQTRARILGAATQALLERGAVEPSVGEVMGAAGLTVGGFYAHFQSKDALMLEAFEQLLGKRRELLGELDPGLSGKE-------RRALAAAFYLSRKHRDAQVDAGCPLPATLAEVAR------LPEGFREVLSRHVEIMVTSLAES------PEETDVALADLVLMIGGLA-----LARALGPGELSDRVLRAAKQAVN------------ |
| 1T33 Chain:A ((1-220)) | MNIPTTTTKGEQAKSQLIAAALAQFGEYG-LHATTRDIAALAGQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60374 for 1254 contacts (-48.1/contact) +
2D Compatibility (PS) -19880 + (NN) -14769 + (LL) 144
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -96679.0 ( -77.10 by residue)
QMean score : 0.454
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