Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFERPILITGGAGFIGSHLTDALLARGYRVRVLDNLSTGKRDNLPLDDERVELLEGDAADAATLAAALKGCAAVAHLAAVASVQASVDDPVATHQSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASEYYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTP--ITVFGDGEQTRDFIYVADLVDFLVQA------LEATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPV----THADARA--GDIRHSRANNERLLRRFRFDQPTPMGVGLARLLGR |
| 3AW9 Chain:C ((3-281)) | -----IVVTGGAGFIGSHLVDKLVELGYEVVVVDIV---QRD--------AELHVRDLKDY-SWGAGIKG-DVVFHFAANPEVR---TEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYG-DADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLR-----HGVIYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAE---VLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMK-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116140 for 2133 contacts (-54.4/contact) +
2D Compatibility (PS) -26991 + (NN) -3066 + (LL) 2156
1D Compatibility (HY) -20800 + (ID) 4950
Total energy: -169791.0 ( -79.60 by residue)
QMean score : 0.482
|
|
|