Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTATDIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESC--NLWQGAQV-ILSTALSSIEGRVLGVDSRGALRLEVDGVE-QGFSGGELSLRLRQ |
| 2E41 Chain:B ((36-232)) | --------------------------------------------------------------------------------------------------VIVADKQTMGHGALNRKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSI-DGRIKWPNDVLVNYKAIAGVLVEGKGD-----KIVLGIGLNVNNKVPNGA----TSMKLELGSEVP---LLSVF-RSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDG--SFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122004 for 1484 contacts (-82.2/contact) +
2D Compatibility (PS) -20340 + (NN) -4317 + (LL) 7804
1D Compatibility (HY) -18000 + (ID) 3500
Total energy: -160357.0 ( -108.06 by residue)
QMean score : 0.476
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