Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTVKTVRELRAAVARA-RSEGKRIGFVPTMGNLHAGHAALVKKAGE-RADFVVVSIFVNPLQFGPSEDLDTYPRTLAADQERLLEAGCHLLFTPTVEEMYPDGMDGQTRIHVPGVSEGLCGASRPGHFEGVATVVSKLLNMVQPDLALFGEKDFQQLAVIRKLVRDLNLPVQIFGEPTVRAADGLALSSRNGYLDEQQRAAAPAIYRTLRQLGERIRAGAEDFPALLADARQALEQAGLRPDYLEIREPISLRPGVPGDRQLVILAAAYLGSTRLIDNLSVHLD |
4MUK Chain:B ((21-287)) | -----------ADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFV----------------TPDDDLAQLRAEGVEIAFTPTTAAMYPDGL--RTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDA--APGVAVDYLELRD-IGLGP-MPLNGSGRLLVAARLGTTRLLDNIAIEI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168494 for 1961 contacts (-85.9/contact) +
2D Compatibility (PS) -27714 + (NN) -16683 + (LL) 904
1D Compatibility (HY) -20800 + (ID) 6100
Total energy: -238887.0 ( -121.82 by residue)
QMean score : 0.544
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