Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQEVRFSRLEPEQRKALLIEATLACLKRHGFQGASVRKICAEAGVSVGLINHHYDGKDALVAEAYLAVTGRVMRLLRGAIDTAPGGARPRLSAFFEASFSAELLDPQLLDAWLAFWGAVGSIEAIGRVHDHSYGEYRALLVGVLRQLAEEGGWADFDAELAAISLSALLDGLWLESGLNPATFTPRQGVQICEAWVDGLEAGAHRRFRRAMEAC
3V6G Chain:A ((14-185))
-------------GRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDALREAALAHAANASADLLAQWRSDLDKD--RDLAATLARLTTVYLADQDRYRTLNELYMAAAHRPELQRLARLWPDGLLALLEPRIG-------------RRAANAVTVFFDGATLHALITGTPLS---------------TDELTDAIARLVADG
General information:
TITO was launched using:
RESULT:
Template:
3V6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120962 for 1281 contacts (-94.4/contact) +
2D Compatibility (PS) -19109 + (NN) -14756 + (LL) 3068
1D Compatibility (HY) -2800 + (ID) 1750
Total energy: -156309.0 ( -122.02 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_3V6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V6G-query.scw
PDB file :
Tito_Scwrl_3V6G.pdb
: