Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPKLFTSQICLLLLLGLLAVEGSLHVKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
2C01 Chain:X ((1-135))
--------------------------MKPPQFTWAQWFETQHINMTSQQCTNAMQVINNYQRRCKNQNTFLLTTFANVVNVCGNPNMTCPSNKTRKNCHHSGSQVPLIHCNLTTPSPQNISNCRYAQTPANMFYIVACDNRDQRRDPPQYPVVPVHLDRII
General information:
TITO was launched using:
RESULT:
Template:
2C01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64068 for 986 contacts (-65.0/contact) +
2D Compatibility (PS) -14277 + (NN) -11592 + (LL) 2556
1D Compatibility (HY) -18000 + (ID) 6700
Total energy: -112081.0 ( -113.67 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_2C01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C01-query.scw
PDB file :
Tito_Scwrl_2C01.pdb
: