Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEMLPTAILLVLAVSVVAKDNATCDGPCGLRFRQNPQGGVRIVGGKAAQHGAWPWMVSLQIFTYNSHRYHTCGGSLLNSRWVLTAAHCFVGKNNV-----HDWRLVFGAKEITYGNNKPVKAPLQERYVEKIIIHEKYNSAT---EGNDIALVEITPPISCGRFIGPGCLP--HFKAGLPRGSQSCWVAGWGYIEEKAPR----PSSILMEARVDLIDLDLCNSTQW--------YNGRVQPTNVCAGYPVGK-IDTCQGDSGGPLMCKDSKESAYVVVGITSWGVGCARAKRPGIYTATWPYLNWIASKIGSNALRMIQSATPPPPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLIEVLKGKTYSDGKNHYDMETTELPELTSTS |
| 1A0L Chain:A ((1-244)) | ------------------------------------------IVGGQEAPRSKWPWQVSLRVHG--PYWMHFCGGSLIHPQWVLTAAHCVGPD---VKDLAA-LRVQLREQHLYY----QD----QLLPVSRIIVHPQFYT--AQI-GADIALLELEEPVKVSSHVHTVTLPPAS---ETFPPGMPCWVTGWGDVDND---ERLPPPFPLKQVKVPIMENHICDA-KYHLGAYTGDDVRIVRDDMLCAGNT---RRDSCQGDSGGPLVCKVN--GTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYVPKK--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188948 for 1836 contacts (-102.9/contact) +
2D Compatibility (PS) -24500 + (NN) -13424 + (LL) 4668
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -244404.0 ( -133.12 by residue)
QMean score : 0.207
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