Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPANYTCTRPDGDNTDFRYFIYAVTYTVILVPGLIGNILALWVFYGYMKETKRAVIFMINLAIADLLQVLSLPLRIFYYLNHDWPFGPGLCMFCFYLKYVNMYASIYFLVCISVRRFWFLMYPFRFHDCKQKYDLY-ISIAGWLIICLACVLFPLLRTSDDTSGNRTKCFVDLPTRNVNLAQSVVMMTIGELIGFVTPLLIVLYCTWKTVLSLQDKYPMAQDLGEKQKALKMILTCAGVFLI----CFAPYHFSFPLDFLVKSNEIKSCLARRVILIFHSVALCLASLNSCLDPVIYYFSTNEFRRRLSRQDLHDSIQLHAKSFVSNHTASTMTPELC |
4EA3 Chain:A ((132-401)) | -------------------------YLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSA-QVEDEEIECLVEIPTPQDYWGPVFAICIF--LFSFIVPVLVISVCYSLMIRRLRGVRLLSGSR-EKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVA---ILRFCTA---LGYVNSCLNPILYAFLDENFKACFR----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254568 for 1920 contacts (-132.6/contact) +
2D Compatibility (PS) -26460 + (NN) -10237 + (LL) 4032
1D Compatibility (HY) -23200 + (ID) 3450
Total energy: -313883.0 ( -163.48 by residue)
QMean score : 0.256
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