Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLGSLGNSSSSVSATFLLSGIPGLERMHIWISIPLCFMYLVSIPGNCTILFIIKTERSLHEPMYLFLSMLALIDLGLSLCTLPTVLGIFWVGAREISHDACFA--QLFFIHCFSFL--ESSV--LLSMAFDRFVAICHPLHYVSILTNTVIGRIGLVSLGRSVALIFPLPFMLKRFPYCGSPVLSHSYCLHQEVMKLAC--ADMKANSIYGMFVIVSTVGIDSLLILFSY----ALILRTVLSIASR---AERF-----KALNTCVSHICAVLLFYTPMIGLSVIHRFGKQAPHLVQVVMGFMYLLF-----PPVMNPIVYSVKTKQIRDRVTHAFCY |
| 3RFM Chain:A ((8-297)) | -----------------------------VYITVELAIAVL-AILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAI--------TISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAA--GIIAICWVLSFAIGLTPMLG-WNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243603 for 1852 contacts (-131.5/contact) +
2D Compatibility (PS) -25210 + (NN) -400 + (LL) 3076
1D Compatibility (HY) -25600 + (ID) 3550
Total energy: -295287.0 ( -159.44 by residue)
QMean score : 0.159
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