Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFYHNKSIFHPVTFFLIGIPGLEDFHMWISGPFCSVYLVALL---GNATILLVIKVEQTLREPMFYFLAILSTIDLALSTTSVPRMLGIFWFDAHEINYGACVAQMFLIHAFTGMEA-------EVLLAMAFDRYVAVCAPLHYATILT-SQVLVGISMCIVIRPVLLTLPMVYLIYRLPFCQAHIIAHSYCEHMGIAKLSCGNIRINGIYGLF--VVSFFVLNLVLIGIS-YVY------ILRAVFRLPSH--DAQLKALSTCGAHVGVICVFYIPSVFSFLTHRFGHQ-IPGYIHILVANLYLIIPPSLNPIIYGVRTKQIRE--RVLYVFTKK |
| 3ZPR Chain:A ((8-299)) | -------------------------QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQA---LKCYQDP------GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------MLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAF-NWLGYANSAMNPIIY-CRSPDFRKAFKRLL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208110 for 1754 contacts (-118.6/contact) +
2D Compatibility (PS) -25128 + (NN) -2546 + (LL) 5072
1D Compatibility (HY) -24000 + (ID) 3500
Total energy: -258212.0 ( -147.21 by residue)
QMean score : 0.168
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