Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERDKPVSVSEFLLLGLSRQPQQQHLLFVFFLSMYLATVLGNLLIILAISIDSRLHTPMYFFLSNMSFVDNCFSTTVPKMLANHILRTQTISFS----GCLMQMYFISELADMDNFLLAVMAYDRFVAVCRPLHYTAKMIHQLCALLVTGSWVVANSNALLHTLLMARLS--FCADNTIPHIFCDVTPLLKLSCSDTHLSEVMILTEAALVTITPFLCLLASYMHITCVVLR---------VPSTKGR--WKAFSTCGSHLAVVLLFYGTIMSP--------YFRTSSSHSAQRDIAAAVRFTVVTPVMNPLIYSLRNKDIKGALVKVVAVKFFSVQ |
| 3RFM Chain:A ((14-303)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAAD-----ILVGVLAIPFAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFEDVVPM-----------NYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217008 for 1945 contacts (-111.6/contact) +
2D Compatibility (PS) -25574 + (NN) -560 + (LL) 4104
1D Compatibility (HY) -23200 + (ID) 3050
Total energy: -265288.0 ( -136.39 by residue)
QMean score : 0.244
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