Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAANESSEGISFVLLGLTTSPGQQRPLFVLFLLLYVASLLGNGLIVAAIQASPALHAPMYFLLAHLSFADLCFASVTVPKMLANLLAHDHSISLAGCLTQMYFFF-ALGVTDSC-LLAAMAYDCYVAIRHPLPYATRMSRAMCAALVGMAWLVSHVHSLLYILLMARLSFCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVVVT------PFLLI----LASYGAIAAAVLQLPSASGRLR---AVSTCGSHLAVVSLFYGTVIAVYFQATSRRE--AEWGRVATVMYTVVTPMLNPIIYSLWNRDVQGALRALLIGRRISASDS |
| 2VT4 Chain:A ((17-297)) | ---------------------------LMALVVLLIVA---GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMM-------------HWWRDEDP-QALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR----------EHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCR-SPDFRKAFKRLLA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239974 for 1798 contacts (-133.5/contact) +
2D Compatibility (PS) -25189 + (NN) -9931 + (LL) 4264
1D Compatibility (HY) -27600 + (ID) 3500
Total energy: -301930.0 ( -167.93 by residue)
QMean score : 0.211
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