Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGDVNQSVASDFILVGLFSHSGSRQLLFSLVAVMFVIGLLGNTVLLFLIRVDSRLHTPMYFLLSQLSLFDIGCPMVTIPKMASDFLRGEGATSYGGGAAQIFFLTLMGV----AEGVLLVLMSYDRYVAVCQPLQYPVLMRRQVCLLMMGSSWVVGVLNASIQTSITLHFPYCASRIVDHFFCEVPALLKLSCADTCAYEMALSTSGVLILMLPLSLIATSYGHVLQAVLSMRSEEAR-----HKAVTTCSSHITVVGLFYGAAVFMYMVPCAYHSPQQDNVVSL-------FYSLVTPTLNPLIYSLRNPEVWMALVKV--LSRAGLRQMC |
4GBR Chain:A ((20-286)) | --------------------------------------VFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL----TKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFL--PIQMHWYRATHQEAINCYAEE------TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKFCLKEHKALKTLG---IIMGTFTLCWLPFFIVNIVH--VIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198224 for 1793 contacts (-110.6/contact) +
2D Compatibility (PS) -24979 + (NN) -6291 + (LL) 4712
1D Compatibility (HY) -20000 + (ID) 2900
Total energy: -247682.0 ( -138.14 by residue)
QMean score : 0.190
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