Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METGNLTWVSDFVFLGLSQTRELQRFLFLMFLFVYITTVMGNILIIITVTSDSQLHTPMYFLLRNLAVLDLCFSSVTAPKMLVDLLSEKKTISYQGCMGQIFFFHFLGGAMVFFLSVMAFDRLIAISRPLRYVTVMNTQLWVGLVVATWVGGFVHSIVQLALMLPLPFCG-PNILDNFY-CDVPQVLRLAC--TDTSLLEFLKISNSGLLDVVWFFLLLMSYLFILVMLRSH---------PGEARR----KAASTCTTHIIVVSMIFVPSIYLY-ARPFTPFPMDK----------LVSIGHTVMTPMLNPMIYTLRNQDMQAAVRRLGRHRLV |
| 3UZC Chain:A ((14-305)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFA---IGLTPMLGWNNCGQP-------GCGEGQV---ACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHT--NSVVNPFIYAYRIREFRQTFRKIIRS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -235918 for 1981 contacts (-119.1/contact) +
2D Compatibility (PS) -26487 + (NN) -12532 + (LL) 4928
1D Compatibility (HY) -21600 + (ID) 3600
Total energy: -295209.0 ( -149.02 by residue)
QMean score : 0.313
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