Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTSLTDLCFSPIQVAEIKSLPKSMNETNHSRVTEFVLLGLSSSRELQPFLFLTFSLLYLAILLGNFLIILTVTSDSRLHTPMYFLLANLSFIDVCVASFATPKMIADFLVERKTISFDACLAQIF---FVHLFTGSEMVLLVSMAYDRYVAICKPLHYMTVMSRRVCVVLVLISWFVGF-IHTTSQLAFTVNLPFCGPNKVDSFFCDLPLVTKLACIDTYVVSLLIVADSGFLS--LSSFLLLVVSYTVILVTVRNR------SSASMAKARSTLTAHI------TVVTLFFGPC--------IFIYVWPFSSYSVDKV--LAVFYTIFTLILNPVIYTLRNKEVKAAMSK-LKSRYLKPSQVSVVIRNVLFLETK |
| 3REY Chain:A ((21-305)) | --------------------------------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP-----FAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNN----CGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -223222 for 1731 contacts (-129.0/contact) +
2D Compatibility (PS) -25080 + (NN) -8531 + (LL) 8276
1D Compatibility (HY) -24800 + (ID) 3450
Total energy: -276807.0 ( -159.91 by residue)
QMean score : 0.214
|
|
|