Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TITC--GQVVST--LTPCISYIRG--------DSTLPQTCCSGVKKLNALASTSPDRQGACSCLKNLASHIPNLNP---------------ARAAGLPGNCGVSVPYPIS--TSTDCSKVR-----
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHI--------SEWCRCGALYSMLDS--MYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47124 for 522 contacts (-90.3/contact) +
2D Compatibility (PS) -7758 + (NN) -2 + (LL) 172
1D Compatibility (HY) -6400 + (ID) 750
Total energy: -61862.0 ( -118.51 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: