Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDYLRISIGSLNEKNFHVIYTNKKYHLIAEDLQNISTIDQTSLYVKDII---KRVLLIGSTSIVISHNHSSGNTQPSSRIYPSLGS
2KKS Chain:A ((54-98))
----------------------------------------HFSMDPREQLTAVKDMRKNGWVMLGNFHSHPATPARPSAEDKRLAFD
General information:
TITO was launched using:
RESULT:
Template:
2KKS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2373 for 158 contacts (-15.0/contact) +
2D Compatibility (PS) -4477 + (NN) -3692 + (LL) 3064
1D Compatibility (HY) 2800 + (ID) 350
Total energy: -5028.0 ( -31.82 by residue)
QMean score : 0.235
(partial model without unconserved sides chains):
PDB file :
Tito_2KKS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KKS-query.scw
PDB file :
Tito_Scwrl_2KKS.pdb
: