Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFEIFTQDFFINSLIAIVIISLVTGALGSFMIWQRLSYLGDSLSHSSLLGIALALIFKISPSISIMLIAIVFAILLSLNFNRLYSVDTILNIVTNVVLSSSLILMSFLPSSNSSIISSLFGNILTLEQSDIVLISLTSIVVVLILIFRWRYWLIISINQDLAIVEKVNVNLVRLEFLITLAIFIAVSAQLIGILLIAAFLLIPAASSRLISKTPMQMIIVATVFSLISGISGLILSASFDLLTGPAIILTATTYLIIAYFIRLMLNRLA |
| 3W5A Chain:C ((5-27)) | -------------------------------------------------------------------------------------------------------------------------------TRELCLNFTVVLITVILIWLLVRSYQY------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6807 for 85 contacts (-80.1/contact) +
2D Compatibility (PS) -2245 + (NN) -784 + (LL) 24304
1D Compatibility (HY) -3600 + (ID) 150
Total energy: 10718.0 ( 126.09 by residue)
QMean score : 0.636
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