Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIESFNDLAPVIHQSRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSPQVVLLSPAESKDVYFAEFGWLDPNGKTKVPDSKTFWQAEKTELTNQKAVNLFWNNENGIVFRMKVSLDNNYMFKVEQIVENNTKDNVVLVPYGKINRKRDNINESYWISHEGILGAFDNKLEEWTYKNVAKKHLIKASTSKKNWFGFADKYWLTAIIPEK-FDKTNVSIKHTNANNVDKFQV------DFVKPYKNILPGTSASNVNYFFAGAKKLNLLDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDSLKQHKETIALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFTLFGLFNYNFPISIGILPIILGITMIIQQKIGEKGQTNKDDIQANVMKFFPYISIFIFSSFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGINVENTNS |
| 3FPC Chain:A ((196-295)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEG----DNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2384 for 562 contacts (4.2/contact) +
2D Compatibility (PS) -9445 + (NN) 442 + (LL) 32016
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: 18747.0 ( 33.36 by residue)
QMean score : 0.050
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