Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQFLNNLILASSSERRIALLKQINIEPGLILPADIDEIPLRKELPKDYSIRMAKSKAEKIQSSNPDYFVLGIDTVVACGRRILLKAKNIEQAEKYIRLLSGRRHRVYTSVCLLTPDRSKQHIRTVVTI--VKFKRLSEREIKYYLASEEWKNRAGGCNMQGLAGMFVLFLRG-SYSSIIGLPLHETYCLLSNYFNLNLY
4LU1 Chain:A ((24-198))
-------KLILASTSPWRRALLEKLQISFECAAP-EVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSAQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALF--NSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGKNPLM
General information:
TITO was launched using:
RESULT:
Template:
4LU1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89034 for 1330 contacts (-66.9/contact) +
2D Compatibility (PS) -19172 + (NN) -9148 + (LL) 920
1D Compatibility (HY) -7600 + (ID) 2850
Total energy: -126884.0 ( -95.40 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_4LU1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LU1-query.scw
PDB file :
Tito_Scwrl_4LU1.pdb
: