Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIENIQQEFFPLFDKIKKEGDPIYNARVGFNIVKSLIERGTGWNKDEIYEVLQKELNKMERAQQELEKEAERVLSRYIIDDDVKGAVKGVSIYGNHASIKLEDNKKEFKISEFLNSDFCQKNGISGFSTLHRDEKSGMHGFVAEEGEGKDKRKVRHYVVTDGSYEMTLNWYDKEGKKCTIRININANSIKLIGGNITEEQLKDLSKANWDVKIGGLFLHEIEFRKTRENEINMSFETAIKIFGRSIQTTDMNREIGSQNAMTSTTNSHAPTKENPPLPPHRVSSLKKGVEQRKTKSLDHQSNGQKVEFNKYIQSNTLDLHELNSMNVPKLLELLKKEQNTTQINLGWNSIDNKNAEKLFRQRGLVIMANCREEENPGDQGYNLQSLFEVPTPSPLRTSSLKKNVSDEQGENISFKPISQSQDNRQKDERYDNLTFVMFRYTTSGRKKTVTEEDLQVKSAVFALPTQDVTLKKVEGTFKSEDAKKSDNMRDKQTSQDGVASILARRAEIEFLYSESERGDGLSDPEDDRSGNKDEYLTLLNPQSDDKNAKRGEKYENCDCNDNLEHIYENTDWLCDDKQDNRQRDKRYDNHTFAMFVYTLPGSKRPDDLHRNEQKLDNQQQPEIQQQGQSHSRPQSDSKGNLDVKGIQPSALSEDGDRPISTSTDKRNTKQLEYGKNSKDHNSETCMVPSKPAGKESKSIQFTNPSNQMVGKLEKVLKKLDRE----SEKTVQQVAEGSVSINKPLSSVSTDGNMDAEQNSHTQSEETNLSTPEKTNVNSSTSFKELEQRLSQKNYELKKISSKVRYISPQTKEYLMEAELLKDSSTDIRKAIERKNAHTSPTTDKNSELYKLLEKDKTQLKVRVIEKVVEGASAKHTDNYDRNRITLGNKNRKLLWTKHVKQQQEKGKGISI |
2G8C Chain:O ((80-249)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKSDGSTLVSKKVTSKDKSSTEEKFNEKGEVSEKIITRA-----DGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEKTTLVVKEGTVTLSK---NISKSGAVSVELN----DTDSSAATKKTAAWNSGTSTLTITVN-SKKTKDLVFTSSN----TITVQQYDSNGTSLEGSAVEITKLDEIKNALK------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 109930 for 1073 contacts (102.5/contact) +
2D Compatibility (PS) -16976 + (NN) 1974 + (LL) 40080
1D Compatibility (HY) -2000 + (ID) 2300
Total energy: 130708.0 ( 121.82 by residue)
QMean score : 0.134
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