Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIIKFVLLLPTILLILTAGVYLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILGGNLGVGNISGTAVALKTGGPGSILWMAIIVIITSVIKYVTCYLSIKNRKKKNGRFIGGPMAYMVDAFNSRKATVVFLVIMIMVSIIVGNLVQVNSLSIPLDMINVPVVTGGIIMTIIFFVVAALSLKKIKIFISAMIPIMTISYLTLCGIILFKFSENILPSLKLITSSFFTTSSFNFGLSLGLVLEMLTIIQVGTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLITIISPFIVAFIVFITTMVLLVTDSWVTGLESTNMCIFAFRKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQTIRYVSQNDKYTKIWIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRDPEVFTVSSRYLKLNQPIFNKNKTRNWLAILILRG |
1S4X Chain:A ((46-57)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TANNPLYKEATS----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2330 for 40 contacts (58.2/contact) +
2D Compatibility (PS) -1256 + (NN) -1228 + (LL) 40936
1D Compatibility (HY) -400 + (ID) 100
Total energy: 40282.0 ( 1007.05 by residue)
QMean score : 0.331
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