Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNIKTISVKDNNVRLDRYIRRIFPNLKQSVIEKSLRRGLIKVNDCKAKSSDRVNSGQIITIKYLDYIENANSDCKHNEKLVELLRSNILYEDEYILAINKPAGVIVQGGIKVKISISDLLDQVREGETFKIVHRLDRDTSGAIIFARNANVARYLMEEFKGRRVKKTYLALTSGIPSKNRGVIDYPLVKKYVSGQEKVVIDKNSPQDATTRFSIIAKFKLNKPLVQRPIIQVADTQLYEHCNLSLSRVCHLSSLSSCYSSALLCHLSAPILVSSKTDHKQAHYTTFSIKKLDSSIMCRNDTRSVAYLKLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAFVDGIASKIHLHSYSLSLKLPNNKKITITAPLPEHIKKSIEALHTPF |
3DH3 Chain:A ((4-152)) | ----------DSSVRLNKYISESGICSRREA-DRYIEQGNVFLNGKRATIGDQVKPGDVVKV---------------NGQLIEPREA----EDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSK--RVFPI-GRLDKDSQGLIFLTNHGDLVNKILR--AGNDHEKEYLV-----------TVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSSSEV------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55945 for 945 contacts (-59.2/contact) +
2D Compatibility (PS) -15756 + (NN) -1160 + (LL) 9968
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -72443.0 ( -76.66 by residue)
QMean score : 0.420
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