Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEQKDKYRPCVGIMLFNKQGHVFIGKRFDS--DSYWQMPQGGIDDGEKLEQAALRELLEEVGTDKAKIIAKNKDWIYYNLPEEVIPTCWNGRYSGQKQRW--FLMKFYGEGKDININYTDHPEFKEWRWQSVDNLVAGA-IPFKKEVYKTVIEEFSSQIKVSIIK
4KYX Chain:A ((14-139))
--------RIGIGILIFNNRNEILLGKRISSHGESSYAPAGGHLEFGETFEECAIREVLEETN-----LIIENPQFI----------AVTNDIFEKEQKHYVSIFLKAHCLNEHELQNLEPH-KVENWQWFALDNLPSNLFLPLKRLIEKKCYLYKEII-------
General information:
TITO was launched using:
RESULT:
Template:
4KYX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41872 for 859 contacts (-48.7/contact) +
2D Compatibility (PS) -13184 + (NN) -7456 + (LL) 2240
1D Compatibility (HY) -9200 + (ID) 1750
Total energy: -71222.0 ( -82.91 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_4KYX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KYX-query.scw
PDB file :
Tito_Scwrl_4KYX.pdb
: