Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKITINSQECEVKPGLTIIQACETVGVEIPRFCYHERLAIAGN-CRMCLVEVKGGPPKPVASCAMPVAEGMVIYTDTPKVKKAREGVLEFLLINHPLDCPICDQGGECDLQDITVVY-GKGNSRFDEHKRAIPKKHFGQLIEAAMNRCIHCTRCIRFLSDVAGTNELGGIGRGENMEISTYIKKHISSE---LSGNIIDLCPVGALTSKPYSFTARPWELSHCETIDVLDAVGSSIRVDYRGPEVMRILPRLNEEVNEEWISDKTRFAYDGLKVQRLDQPYIKRDNRLVPADWNEALTVAAKKLRSTKPNKIAAIAGDLADCESMLLLKEIMQKLGSSNIDCRQDGAKLIPNNRGSYVFNTTIEGIENVDLCLLINTNPKVEAPIINARIRKRYLQGNFPIASIGPDIEYLYHVEKLGNNPGVLNEIAKGNHKFCKLLSAAQNPMLIIGQDALTRDDSESILALAGAIAEKFNMVRNDWNGFNVLHKAAARVGGLDIGFVPKKDGKNINQILEQAESGEIEVVYLLGADEINTLKLENAFVIYQGHHGDRGAHMADIILPGAAYTEKYATYVNTEGRVQRAKLAVSPPGEAKEDWSIIKNLSQYLGLSLPYDSLFDVRKKLDAIGPQFRNTDQVVKNKWMSITCNEIKLSSVPFFLKECNFYMTDSISRASKIMANCTKAFYEHAS |
| 3C8Y Chain:A ((1-210)) | MKTIIINGVQFNTDEDTTILKFARDNNIDISALCFLNNCNNDINKCEICTVEVEG--TGLVTACDTLIEDGMIINTNSDAVNEKIKSRISQLLDIHEFKCGPCNRRENCEFLKLVIKYKARASKPFLPKDKTEYVDERSKSLTVDRTKCLLCGRCVNACGKNTETYAMKFLNKNGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALSEKSHMDRVKNALNAPEKHVIVAMAPSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRIENNGPFPMFTSCCPGWVRQAENYYPELLNNLSSAKSPQQIFGTASKTYYPSISGLDPKNVFTVTVMPCTSKKFEADRPQMEKDGLRDIDAVITTRELAKMIKDAKIPFAKLEDSEADPAMGEYSGAGAIFGATGGVMEAALRSAKDFAENAELEDIEYKQVRGLNGIKEAEVEINNNKYNVAVINGASNLFKFMKSGMINEKQYHFIEVMACHGGCVNGGGQPHVNPKDLEKVDIKKVRASVLYNQDEHLSKRKSHENTALVKMYQNYFGKPGEGRAHEILHFKYKK--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145949 for 1585 contacts (-92.1/contact) +
2D Compatibility (PS) -21937 + (NN) -9718 + (LL) 7292
1D Compatibility (HY) -11200 + (ID) 2300
Total energy: -183812.0 ( -115.97 by residue)
QMean score : 0.330
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