Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIVLATG---GTGGHIFPAITLARAIKRQGYDSILFADKKTGKNTDV-KDYTLPLNKPGGNKFRFFLLLIYSCVLALYQIRKLKPKLVIGFGGYASFPTLLAAKVLSIPIILHEQNAV---L------GRVNKFF--FNSAELIATSFPETKYAK-------GNKCVFIGNFVDIKAKSH--------------SSTKKILTVLIIAGSQGANFFDDVVSSVICNLPIEIRKKIRVVQQCMKKNMNKVEGLYKG--GQVICELSEFFDDMGSRLTDAHLVISRA----GATSIAEITLARRPAIYIPYPCSKDDHQFYNAEYIKDSGAAVVV-EQNSEVKKNLTKLLVNLLGDSQKLRDMANNTKKIRIKNGVTEFIRIVIHKLG |
| 2IW1 Chain:A ((2-368)) | -IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKSHTN--H---GRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRKGV-DRSIEALASLPESLRHNTLL-FVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCG--------YAHYIADANCGTVIAEPFS--QEQLNEVLRKALTQSPLRMAWAENARHYADTQDLYSLPEKAADIIT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213856 for 2598 contacts (-82.3/contact) +
2D Compatibility (PS) -35039 + (NN) -15493 + (LL) 1240
1D Compatibility (HY) -1200 + (ID) 2150
Total energy: -266498.0 ( -102.58 by residue)
QMean score : 0.482
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